Calculate the Average Metadata Values¶

Function to calculate the average gene expression for one or more (combined) annotation columns.

calculateMetaTableCells(
    gobject,
    value_cols = NULL,
    metadata_cols = NULL,
    spat_enr_names = NULL
)

Arguments¶

gobject	giotto object
value_cols	metadata or enrichment value columns to use
metadata_cols	annotation columns found in pDataDT(gobject)
spat_enr_names	which spatial enrichment results to include

A data.table with average metadata values per (combined) annotation