Cluster Genes Using Spatial Information

clusterSpatialCorGenes()

Cluster based on spatially correlated genes.

clusterSpatialCorGenes(
    spatCorObject,
    name = "spat_clus",
    hclust_method = "ward.D",
    k = 10,
    return_obj = TRUE
)

Arguments

spatCorObject	spatial correlation object
name	name for spatial clustering results
hclust_method	method for hierarchical clustering
k	number of clusters to extract
return_obj	return spatial correlation object (spatCorObject)

Value

A spatCorObject or cluster result.